Package: copyseparator
Type: Package
Title: Assembling Long Gene Copies from Short Read Data
Version: 1.2.0
Author: Lei Yang
Maintainer: Lei Yang <leiyangslu@gmail.com>
Description: Assembles two or more gene copies from short-read
        Next-Generation Sequencing data. Works best when there are only
        two gene copies and read length >=250 base pairs. High and
        relatively even coverage are important.
License: GPL-2
URL: https://github.com/LeiYang-Fish/copyseparator
BugReports: https://github.com/LeiYang-Fish/copyseparator/issues
Depends: R (>= 3.5.0)
Encoding: UTF-8
Imports: ape, seqinr, stringr, kmer, DECIPHER, beepr, Biostrings,
        grDevices, doParallel, foreach, parallel
RoxygenNote: 7.2.1
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/pak/sysreqs: libicu-dev libssl-dev zlib1g-dev
Repository: https://leiyang-fish.r-universe.dev
Date/Publication: 2024-12-23 02:16:22 UTC
RemoteUrl: https://github.com/leiyang-fish/copyseparator
RemoteRef: HEAD
RemoteSha: cc291b63edda24c7ebdd14535d9915ed63b3b65b
NeedsCompilation: no
Packaged: 2026-10-01 10:05:44 UTC; root